Dane Gregory Deemer

Dane provides general support and content for the Anvil and Anvil Composable Clusters. Prior to joining RCAC, Dane spent over 5 years working as a Senior Computational Biologist focused on large-scale metagenomics analyses, as well as various other multi-omics applications. He specializes in full-stack software engineering and toolbuilding for the research science community. More recently, Dane has been researching large-scale federated data systems and complex software environment manage across distributed systems.

Education

M.A., Cell & Molecular Biology - Bioinformatics specialization, Oakland University
B.A, Biology, Albion College

Engagement

Member, Purdue Applied Microbiome Sciences
Member, Whistler Center for Carbohydrate Research
Member, US-Research Software Engineer Association

Selected Publications

Deemer, Dane & Voreades, Noah & Goodwin, Ben & Bron, Peter & Lindemann, Stephen. (2023). Botanicals impact the bifidogenic effect and metabolic outputs of in vitro fiber fermentation by gut-derived microbiota in individual-specific ways. 10.1101/2023.04.17.537114.
Fricker, Ashwana & Deemer, Dane & Tuncil, Yunus & Thakkar, Riya & Marcia, Arianna & Emsley, Connor & Lindemann, Stephen. (2025). The effect of particle size on wheat bran fermentation by human gut microbiota. 10.1101/2025.05.15.654185.
Yao, Tianming & Deemer, Dane & Chen, Ming-Hsu & Reuhs, Bradly & Hamaker, Bruce & Lindemann, Stephen. (2022). SUBTLE DIFFERENCES IN FINE POLYSACCHARIDE STRUCTURES GOVERN SELECTION AND SUCCESSION OF HUMAN GUT MICROBIOTA. 10.1101/2022.10.04.510853.
Yao, Tianming & Deemer, Dane & Chen, Ming-Hsu & Reuhs, Bradley & Hamaker, Bruce & Lindemann, Stephen. (2023). Differences in fine arabinoxylan structures govern microbial selection and competition among human gut microbiota. Carbohydrate Polymers. 316. 121039. 10.1016/j.carbpol.2023.121039.
Yaşar, Arife & Ryu, Hye-Jung & Esen, Emine & Sarıoğlan, İhsan & Deemer, Dane & Çetin, Bülent & Yoo, Sang-Ho & Lindemann, Stephen & Lee, Byung-Hoo & Tuncil, Yunus. (2024). The branching ratio of enzymatically synthesized α-glucans impacts microbiome and metabolic outcomes of in vitro fecal fermentation. Carbohydrate polymers. 335. 122087. 10.1016/j.carbpol.2024.122087.
Powers M, Liu L, Deemer D, Chen S, Scholl A, Yoshinaga M, Liu Z. Selenite Inhibits Notch Signaling in Cells and Mice. Int J Mol Sci. 2021 Mar 3;22(5):2518. doi:10.3390/ijms22052518. PMID: 33802299; PMCID: PMC7959125.

Links

Github: https://github.com/wintermutant

LinkedIn: https://www.linkedin.com/in/dane-deemer-054350100/