specfem3d

Link to section 'Description' of 'specfem3d' Description

SPECFEM3D Cartesian simulates acoustic fluid, elastic solid, coupled acoustic/elastic, poroelastic or seismic wave propagation in any type of conforming mesh of hexahedra structured or not. It can, for instance, model seismic waves propagating in sedimentary basins or any other regional geological model following earthquakes. It can also be used for non-destructive testing or for ocean acoustics.

Link to section 'Versions' of 'specfem3d' Versions

Bell: 20201122--h9c0626d1
Negishi: 20201122--h9c0626d1

Link to section 'Module' of 'specfem3d' Module

You can load the modules by:

module load rocmcontainers
module load specfem3d

Link to section 'Example job' of 'specfem3d' Example job

Using #!/bin/sh -l as shebang in the slurm job script will cause the failure of some biocontainer modules. Please use #!/bin/bash instead.

To run specfem3d on our clusters:

#!/bin/bash
#SBATCH -A gpu
#SBATCH -t 1:00:00
#SBATCH -N 1
#SBATCH -n 1
#SBATCH -c 8
#SBATCH --gpus-per-node=1
#SBATCH --job-name=specfem3d
#SBATCH --mail-type=FAIL,BEGIN,END
#SBATCH --error=%x-%J-%u.err
#SBATCH --output=%x-%J-%u.out

module --force purge
ml rocmcontainers specfem3d