Specific Applications

Compute
Bell User Guide
Gilbreth User Guide
Weber User Guide
Scholar User Guide
Hammer User Guide
Negishi User Guide
- Overview of Negishi
- Biography of Ei-ichi Negishi
- Accounts
- File Storage and Transfer
- Gateway (Open OnDemand)
- Software
- Compiling Source Code
- Running Jobs
  - Basics of SLURM Jobs
  - PBS to Slurm
  - Example Jobs
    - Generic SLURM Jobs
    - Specific Applications
      - Gaussian
      - Matlab
      - Python
      - R
      - Singularity
      - Windows
      - BioContainers Collection
      - Ansys Fluent
      - Apptainer
      - VASP
- Frequently Asked Questions
- Datasets
Geddes User Guide
Anvil User Guide
Gautschi User Guide
Datasets
iGenomes
Software Catalog
Compilers
MPIs
Applications
Utilities
Biocontainers
NVIDIA NGC containers
AMD ROCm containers
FAQs
Storage
Data Depot User Guide
Fortress User Guide
REED Folder User Guide
Box Research Lab Folder User Guide
Scratch User Guide
Home Directory User Guide
Services
High-Performance Computing
Services Guides
Slurm
Depot Object User Guide
Rowdy User Guide
Environment Management with the Module Command
Protected Data Filesystem User Guide
Protected Data Archive User Guide

Specific Applications

The following examples demonstrate job submission files for some common real-world applications. See the Generic SLURM Examples section for more examples on job submissions that can be adapted for use.

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